WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59H11AR.2b.1 Sequence Name  Y59H11AR.2b.1
Length (nt)  3336   Chromosome Location  IV: 8589919-8594245
Chromosome . Primary Identifier  IV Chromosome Location . Start  8589919
Chromosome Location . End  8594245 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59H11AR.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022010 catp-7 Y59H11AR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59H11AR.2b Y59H11AR.2b 3336   IV: 8589919-8590062

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59H11AR.2b.1 8589919 8594245 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134074   144   IV: 8589919-8590062 Caenorhabditis elegans
Exon134076   816   IV: 8590270-8591085 Caenorhabditis elegans
Exon134078   225   IV: 8591129-8591353 Caenorhabditis elegans
Exon134080   142   IV: 8591408-8591549 Caenorhabditis elegans
Exon134082   104   IV: 8591635-8591738 Caenorhabditis elegans
Exon134084   164   IV: 8591811-8591974 Caenorhabditis elegans
Exon134086   112   IV: 8592021-8592132 Caenorhabditis elegans
Exon134088   195   IV: 8592180-8592374 Caenorhabditis elegans
Exon134090   191   IV: 8592444-8592634 Caenorhabditis elegans
Exon134092   163   IV: 8592718-8592880 Caenorhabditis elegans
Exon134094   333   IV: 8592931-8593263 Caenorhabditis elegans
Exon134096   414   IV: 8593336-8593749 Caenorhabditis elegans
Exon134098   132   IV: 8593795-8593926 Caenorhabditis elegans
Exon134100   173   IV: 8593991-8594163 Caenorhabditis elegans
Exon134101   28   IV: 8594218-8594245 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59H11AR.2b.1 8589919 8594245 1

1 Sequence

Length
3336

1 Sequence Ontology Term

Identifier Name Description
transcript