WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42A9.5.2 Sequence Name  F42A9.5.2
Length (nt)  1623   Chromosome Location  IV: 8612443-8614695
Chromosome . Primary Identifier  IV Chromosome Location . Start  8612443
Chromosome Location . End  8614695 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A9.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018334 cyp-33E2 F42A9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42A9.5 F42A9.5 1485   IV: 8612580-8612661

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42A9.5.2 8612443 8614695 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134116   56   IV: 8612443-8612498 Caenorhabditis elegans
Exon134120   83   IV: 8612579-8612661 Caenorhabditis elegans
Exon134122   85   IV: 8612712-8612796 Caenorhabditis elegans
Exon134125   149   IV: 8612845-8612993 Caenorhabditis elegans
Exon134128   113   IV: 8613041-8613153 Caenorhabditis elegans
Exon134131   132   IV: 8613198-8613329 Caenorhabditis elegans
Exon134134   136   IV: 8613375-8613510 Caenorhabditis elegans
Exon134137   163   IV: 8613556-8613718 Caenorhabditis elegans
Exon134140   211   IV: 8613785-8613995 Caenorhabditis elegans
Exon134143   138   IV: 8614154-8614291 Caenorhabditis elegans
Exon134146   357   IV: 8614339-8614695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42A9.5.2 8612443 8614695 1

1 Sequence

Length
1623

1 Sequence Ontology Term

Identifier Name Description
transcript