WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42A9.7.1 Sequence Name  F42A9.7.1
Length (nt)  927   Chromosome Location  IV: 8616004-8617147
Chromosome . Primary Identifier  IV Chromosome Location . Start  8616004
Chromosome Location . End  8617147 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A9.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018336 F42A9.7 F42A9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42A9.7 F42A9.7 804   IV: 8616059-8616532

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42A9.7.1 8616004 8617147 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134152   529   IV: 8616004-8616532 Caenorhabditis elegans
Exon134153   222   IV: 8616700-8616921 Caenorhabditis elegans
Exon134154   176   IV: 8616972-8617147 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42A9.7.1 8616004 8617147 -1

1 Sequence

Length
927

1 Sequence Ontology Term

Identifier Name Description
transcript