WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42A9.5.1 Sequence Name  F42A9.5.1
Length (nt)  1687   Chromosome Location  IV: 8612334-8614695
Chromosome . Primary Identifier  IV Chromosome Location . Start  8612334
Chromosome Location . End  8614695 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018334 cyp-33E2 F42A9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42A9.5 F42A9.5 1485   IV: 8612580-8612661

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42A9.5.1 8612334 8614695 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134170   120   IV: 8612334-8612453 Caenorhabditis elegans
Exon134174   83   IV: 8612579-8612661 Caenorhabditis elegans
Exon134176   85   IV: 8612712-8612796 Caenorhabditis elegans
Exon134179   149   IV: 8612845-8612993 Caenorhabditis elegans
Exon134182   113   IV: 8613041-8613153 Caenorhabditis elegans
Exon134185   132   IV: 8613198-8613329 Caenorhabditis elegans
Exon134188   136   IV: 8613375-8613510 Caenorhabditis elegans
Exon134191   163   IV: 8613556-8613718 Caenorhabditis elegans
Exon134194   211   IV: 8613785-8613995 Caenorhabditis elegans
Exon134197   138   IV: 8614154-8614291 Caenorhabditis elegans
Exon134200   357   IV: 8614339-8614695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42A9.5.1 8612334 8614695 1

1 Sequence

Length
1687

1 Sequence Ontology Term

Identifier Name Description
transcript