WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49C8.4.1 Sequence Name  C49C8.4.1
Length (nt)  1753   Chromosome Location  IV: 8645521-8648602
Chromosome . Primary Identifier  IV Chromosome Location . Start  8645521
Chromosome Location . End  8648602 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49C8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016768 cyp-33E1 C49C8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49C8.4 C49C8.4 1485   IV: 8645582-8645857

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49C8.4.1 8645521 8648602 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134222   337   IV: 8645521-8645857 Caenorhabditis elegans
Exon134224   138   IV: 8645903-8646040 Caenorhabditis elegans
Exon134226   211   IV: 8646631-8646841 Caenorhabditis elegans
Exon134228   163   IV: 8646887-8647049 Caenorhabditis elegans
Exon134230   136   IV: 8647173-8647308 Caenorhabditis elegans
Exon134232   132   IV: 8647353-8647484 Caenorhabditis elegans
Exon134234   113   IV: 8647533-8647645 Caenorhabditis elegans
Exon134236   149   IV: 8647711-8647859 Caenorhabditis elegans
Exon134238   85   IV: 8647968-8648052 Caenorhabditis elegans
Exon134240   83   IV: 8648099-8648181 Caenorhabditis elegans
Exon134242   206   IV: 8648397-8648602 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49C8.4.1 8645521 8648602 -1

1 Sequence

Length
1753

1 Sequence Ontology Term

Identifier Name Description
transcript