WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49C8.4.2 Sequence Name  C49C8.4.2
Length (nt)  1538   Chromosome Location  IV: 8645530-8648181
Chromosome . Primary Identifier  IV Chromosome Location . Start  8645530
Chromosome Location . End  8648181 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49C8.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016768 cyp-33E1 C49C8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49C8.4 C49C8.4 1485   IV: 8645582-8645857

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49C8.4.2 8645530 8648181 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134223   328   IV: 8645530-8645857 Caenorhabditis elegans
Exon134225   138   IV: 8645903-8646040 Caenorhabditis elegans
Exon134227   211   IV: 8646631-8646841 Caenorhabditis elegans
Exon134229   163   IV: 8646887-8647049 Caenorhabditis elegans
Exon134231   136   IV: 8647173-8647308 Caenorhabditis elegans
Exon134233   132   IV: 8647353-8647484 Caenorhabditis elegans
Exon134235   113   IV: 8647533-8647645 Caenorhabditis elegans
Exon134237   149   IV: 8647711-8647859 Caenorhabditis elegans
Exon134239   85   IV: 8647968-8648052 Caenorhabditis elegans
Exon134241   83   IV: 8648099-8648181 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49C8.4.2 8645530 8648181 -1

1 Sequence

Length
1538

1 Sequence Ontology Term

Identifier Name Description
transcript