WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49C8.4.1 Sequence Name  C49C8.4.1
Length (nt)  1753   Chromosome Location  IV: 8645521-8648602
Chromosome . Primary Identifier  IV Chromosome Location . Start  8645521
Chromosome Location . End  8648602 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49C8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016768 cyp-33E1 C49C8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49C8.4 C49C8.4 1485   IV: 8645582-8645857

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49C8.4.1 8645521 8648602 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134277   337   IV: 8645521-8645857 Caenorhabditis elegans
Exon134279   138   IV: 8645903-8646040 Caenorhabditis elegans
Exon134281   211   IV: 8646631-8646841 Caenorhabditis elegans
Exon134283   163   IV: 8646887-8647049 Caenorhabditis elegans
Exon134285   136   IV: 8647173-8647308 Caenorhabditis elegans
Exon134287   132   IV: 8647353-8647484 Caenorhabditis elegans
Exon134289   113   IV: 8647533-8647645 Caenorhabditis elegans
Exon134291   149   IV: 8647711-8647859 Caenorhabditis elegans
Exon134293   85   IV: 8647968-8648052 Caenorhabditis elegans
Exon134295   83   IV: 8648099-8648181 Caenorhabditis elegans
Exon134297   206   IV: 8648397-8648602 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49C8.4.1 8645521 8648602 -1

1 Sequence

Length
1753

1 Sequence Ontology Term

Identifier Name Description
transcript