WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B4.4.1 Sequence Name  F08B4.4.1
Length (nt)  452   Chromosome Location  IV: 8678696-8679325
Chromosome . Primary Identifier  IV Chromosome Location . Start  8678696
Chromosome Location . End  8679325 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017236 nlp-60 F08B4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B4.4 F08B4.4 327   IV: 8678802-8678929

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08B4.4.1 8678696 8679325 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134365   234   IV: 8678696-8678929 Caenorhabditis elegans
Exon134366   110   IV: 8679014-8679123 Caenorhabditis elegans
Exon134367   108   IV: 8679218-8679325 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08B4.4.1 8678696 8679325 -1

1 Sequence

Length
452

1 Sequence Ontology Term

Identifier Name Description
transcript