WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B4.5.1 Sequence Name  F08B4.5.1
Length (nt)  1898   Chromosome Location  IV: 8682240-8686610
Chromosome . Primary Identifier  IV Chromosome Location . Start  8682240
Chromosome Location . End  8686610 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017237 pole-2 F08B4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B4.5 F08B4.5 1566   IV: 8682572-8682832

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08B4.5.1 8682240 8686610 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134368   593   IV: 8682240-8682832 Caenorhabditis elegans
Exon134369   67   IV: 8684013-8684079 Caenorhabditis elegans
Exon134370   149   IV: 8684447-8684595 Caenorhabditis elegans
Exon134371   225   IV: 8684764-8684988 Caenorhabditis elegans
Exon134372   99   IV: 8685257-8685355 Caenorhabditis elegans
Exon134373   231   IV: 8685407-8685637 Caenorhabditis elegans
Exon134374   117   IV: 8685690-8685806 Caenorhabditis elegans
Exon134375   160   IV: 8685952-8686111 Caenorhabditis elegans
Exon134376   76   IV: 8686257-8686332 Caenorhabditis elegans
Exon134377   101   IV: 8686383-8686483 Caenorhabditis elegans
Exon134378   80   IV: 8686531-8686610 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08B4.5.1 8682240 8686610 -1

1 Sequence

Length
1898

1 Sequence Ontology Term

Identifier Name Description
transcript