WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B4.7.1 Sequence Name  F08B4.7.1
Length (nt)  649   Chromosome Location  IV: 8686756-8687810
Chromosome . Primary Identifier  IV Chromosome Location . Start  8686756
Chromosome Location . End  8687810 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B4.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017238 snrp-3 F08B4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B4.7 F08B4.7 429   IV: 8686975-8687070

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08B4.7.1 8686756 8687810 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134379   315   IV: 8686756-8687070 Caenorhabditis elegans
Exon134380   150   IV: 8687225-8687374 Caenorhabditis elegans
Exon134381   66   IV: 8687488-8687553 Caenorhabditis elegans
Exon134382   118   IV: 8687693-8687810 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08B4.7.1 8686756 8687810 -1

1 Sequence

Length
649

1 Sequence Ontology Term

Identifier Name Description
transcript