WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B4.1a.1 Sequence Name  F08B4.1a.1
Length (nt)  3414   Chromosome Location  IV: 8691745-8696553
Chromosome . Primary Identifier  IV Chromosome Location . Start  8691745
Chromosome Location . End  8696553 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000994 ints-6 F08B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B4.1a F08B4.1a 2610   IV: 8692130-8692240

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08B4.1a.1 8691745 8696553 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134392   496   IV: 8691745-8692240 Caenorhabditis elegans
Exon134394   96   IV: 8692287-8692382 Caenorhabditis elegans
Exon134396   318   IV: 8692498-8692815 Caenorhabditis elegans
Exon134398   217   IV: 8692875-8693091 Caenorhabditis elegans
Exon134401   163   IV: 8693183-8693345 Caenorhabditis elegans
Exon134402   169   IV: 8693426-8693594 Caenorhabditis elegans
Exon134404   222   IV: 8693685-8693906 Caenorhabditis elegans
Exon134406   189   IV: 8693985-8694173 Caenorhabditis elegans
Exon134408   123   IV: 8694224-8694346 Caenorhabditis elegans
Exon134410   101   IV: 8694389-8694489 Caenorhabditis elegans
Exon134412   95   IV: 8694865-8694959 Caenorhabditis elegans
Exon134414   56   IV: 8695009-8695064 Caenorhabditis elegans
Exon134416   114   IV: 8695112-8695225 Caenorhabditis elegans
Exon134418   390   IV: 8695314-8695703 Caenorhabditis elegans
Exon134420   97   IV: 8695832-8695928 Caenorhabditis elegans
Exon134422   568   IV: 8695986-8696553 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08B4.1a.1 8691745 8696553 1

1 Sequence

Length
3414

1 Sequence Ontology Term

Identifier Name Description
transcript