WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F08B4.1b.1 Sequence Name  F08B4.1b.1
Length (nt)  3097   Chromosome Location  IV: 8692082-8696564
Chromosome . Primary Identifier  IV Chromosome Location . Start  8692082
Chromosome Location . End  8696564 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B4.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000994 ints-6 F08B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B4.1b F08B4.1b 2619   IV: 8692130-8692240

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08B4.1b.1 8692082 8696564 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134393   159   IV: 8692082-8692240 Caenorhabditis elegans
Exon134395   96   IV: 8692287-8692382 Caenorhabditis elegans
Exon134397   318   IV: 8692498-8692815 Caenorhabditis elegans
Exon134399   217   IV: 8692875-8693091 Caenorhabditis elegans
Exon134400   172   IV: 8693174-8693345 Caenorhabditis elegans
Exon134403   169   IV: 8693426-8693594 Caenorhabditis elegans
Exon134405   222   IV: 8693685-8693906 Caenorhabditis elegans
Exon134407   189   IV: 8693985-8694173 Caenorhabditis elegans
Exon134409   123   IV: 8694224-8694346 Caenorhabditis elegans
Exon134411   101   IV: 8694389-8694489 Caenorhabditis elegans
Exon134413   95   IV: 8694865-8694959 Caenorhabditis elegans
Exon134415   56   IV: 8695009-8695064 Caenorhabditis elegans
Exon134417   114   IV: 8695112-8695225 Caenorhabditis elegans
Exon134419   390   IV: 8695314-8695703 Caenorhabditis elegans
Exon134421   97   IV: 8695832-8695928 Caenorhabditis elegans
Exon134423   579   IV: 8695986-8696564 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08B4.1b.1 8692082 8696564 1

1 Sequence

Length
3097

1 Sequence Ontology Term

Identifier Name Description
transcript