WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21D5.3a.1 Sequence Name  F21D5.3a.1
Length (nt)  2328   Chromosome Location  IV: 8730815-8735689
Chromosome . Primary Identifier  IV Chromosome Location . Start  8730815
Chromosome Location . End  8735689 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21D5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009008 F21D5.3 F21D5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21D5.3a F21D5.3a 2232   IV: 8730827-8730931

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F21D5.3a.1 8730815 8735689 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134512   117   IV: 8730815-8730931 Caenorhabditis elegans
Exon134513   108   IV: 8731267-8731374 Caenorhabditis elegans
Exon134514   155   IV: 8731575-8731729 Caenorhabditis elegans
Exon134515   260   IV: 8731783-8732042 Caenorhabditis elegans
Exon134516   95   IV: 8732184-8732278 Caenorhabditis elegans
Exon134517   121   IV: 8732324-8732444 Caenorhabditis elegans
Exon134518   123   IV: 8732807-8732929 Caenorhabditis elegans
Exon134519   119   IV: 8732976-8733094 Caenorhabditis elegans
Exon134520   199   IV: 8733140-8733338 Caenorhabditis elegans
Exon134521   182   IV: 8733384-8733565 Caenorhabditis elegans
Exon134522   108   IV: 8733857-8733964 Caenorhabditis elegans
Exon134524   398   IV: 8734013-8734410 Caenorhabditis elegans
Exon134526   85   IV: 8735294-8735378 Caenorhabditis elegans
Exon134531   258   IV: 8735432-8735689 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F21D5.3a.1 8730815 8735689 1

1 Sequence

Length
2328

1 Sequence Ontology Term

Identifier Name Description
transcript