WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20C5.7.1 Sequence Name  F20C5.7.1
Length (nt)  991   Chromosome Location  IV: 8744411-8745691
Chromosome . Primary Identifier  IV Chromosome Location . Start  8744411
Chromosome Location . End  8745691 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20C5.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008972 F20C5.7 F20C5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20C5.7 F20C5.7 927   IV: 8744411-8744623

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20C5.7.1 8744411 8745691 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134557   213   IV: 8744411-8744623 Caenorhabditis elegans
Exon134558   229   IV: 8744687-8744915 Caenorhabditis elegans
Exon134559   156   IV: 8745038-8745193 Caenorhabditis elegans
Exon134560   95   IV: 8745240-8745334 Caenorhabditis elegans
Exon134561   298   IV: 8745394-8745691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20C5.7.1 8744411 8745691 -1

1 Sequence

Length
991

1 Sequence Ontology Term

Identifier Name Description
transcript