WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20C5.11.1 Sequence Name  F20C5.11.1
Length (nt)  1636   Chromosome Location  IV: 8755035-8758249
Chromosome . Primary Identifier  IV Chromosome Location . Start  8755035
Chromosome Location . End  8758249 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20C5.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00303015 F20C5.11 F20C5.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20C5.11 F20C5.11 966   IV: 8755280-8755457

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20C5.11.1 8755035 8758249 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134699   423   IV: 8755035-8755457 Caenorhabditis elegans
Exon134700   387   IV: 8755533-8755919 Caenorhabditis elegans
Exon134702   168   IV: 8755969-8756136 Caenorhabditis elegans
Exon134704   197   IV: 8756439-8756635 Caenorhabditis elegans
Exon134706   123   IV: 8756685-8756807 Caenorhabditis elegans
Exon134713   89   IV: 8757137-8757225 Caenorhabditis elegans
Exon134719   146   IV: 8757508-8757653 Caenorhabditis elegans
Exon134724   103   IV: 8758147-8758249 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20C5.11.1 8755035 8758249 -1

1 Sequence

Length
1636

1 Sequence Ontology Term

Identifier Name Description
transcript