WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20C5.11.2 Sequence Name  F20C5.11.2
Length (nt)  3574   Chromosome Location  IV: 8755035-8761996
Chromosome . Primary Identifier  IV Chromosome Location . Start  8755035
Chromosome Location . End  8761996 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20C5.11.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00303015 F20C5.11 F20C5.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20C5.11 F20C5.11 966   IV: 8755280-8755457

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F20C5.11.2 8755035 8761996 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134698   423   IV: 8755035-8755457 Caenorhabditis elegans
Exon134701   387   IV: 8755533-8755919 Caenorhabditis elegans
Exon134703   168   IV: 8755969-8756136 Caenorhabditis elegans
Exon134705   197   IV: 8756439-8756635 Caenorhabditis elegans
Exon134707   123   IV: 8756685-8756807 Caenorhabditis elegans
Exon134714   89   IV: 8757137-8757225 Caenorhabditis elegans
Exon134720   146   IV: 8757508-8757653 Caenorhabditis elegans
Exon134725   103   IV: 8758147-8758249 Caenorhabditis elegans
Exon134727   116   IV: 8758820-8758935 Caenorhabditis elegans
Exon134729   143   IV: 8759026-8759168 Caenorhabditis elegans
Exon134731   98   IV: 8759387-8759484 Caenorhabditis elegans
Exon134733   961   IV: 8759536-8760496 Caenorhabditis elegans
Exon134735   71   IV: 8760548-8760618 Caenorhabditis elegans
Exon134737   93   IV: 8760671-8760763 Caenorhabditis elegans
Exon134739   250   IV: 8760807-8761056 Caenorhabditis elegans
Exon134741   105   IV: 8761196-8761300 Caenorhabditis elegans
Exon134743   56   IV: 8761350-8761405 Caenorhabditis elegans
Exon134745   45   IV: 8761952-8761996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F20C5.11.2 8755035 8761996 -1

1 Sequence

Length
3574

1 Sequence Ontology Term

Identifier Name Description
transcript