WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33D9.1c.1 Sequence Name  C33D9.1c.1
Length (nt)  3105   Chromosome Location  IV: 8799081-8813670
Chromosome . Primary Identifier  IV Chromosome Location . Start  8799081
Chromosome Location . End  8813670 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33D9.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001366 exc-5 C33D9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33D9.1c C33D9.1c 2586   IV: 8799469-8799684

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33D9.1c.1 8799081 8813670 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134821   604   IV: 8799081-8799684 Caenorhabditis elegans
Exon134825   84   IV: 8799737-8799820 Caenorhabditis elegans
Exon134828   229   IV: 8800016-8800244 Caenorhabditis elegans
Exon134831   74   IV: 8800297-8800370 Caenorhabditis elegans
Exon134834   186   IV: 8800416-8800601 Caenorhabditis elegans
Exon134837   240   IV: 8800659-8800898 Caenorhabditis elegans
Exon134840   337   IV: 8800951-8801287 Caenorhabditis elegans
Exon134843   152   IV: 8801338-8801489 Caenorhabditis elegans
Exon134846   249   IV: 8801597-8801845 Caenorhabditis elegans
Exon134849   85   IV: 8801894-8801978 Caenorhabditis elegans
Exon134852   130   IV: 8802582-8802711 Caenorhabditis elegans
Exon134855   79   IV: 8802761-8802839 Caenorhabditis elegans
Exon134858   126   IV: 8802891-8803016 Caenorhabditis elegans
Exon134862   165   IV: 8803964-8804128 Caenorhabditis elegans
Exon134864   182   IV: 8804676-8804857 Caenorhabditis elegans
Exon134865   183   IV: 8813488-8813670 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33D9.1c.1 8799081 8813670 -1

1 Sequence

Length
3105

1 Sequence Ontology Term

Identifier Name Description
transcript