WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33D9.1b.1 Sequence Name  C33D9.1b.1
Length (nt)  2861   Chromosome Location  IV: 8799089-8804804
Chromosome . Primary Identifier  IV Chromosome Location . Start  8799089
Chromosome Location . End  8804804 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33D9.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001366 exc-5 C33D9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33D9.1b C33D9.1b 2481   IV: 8799469-8799684

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33D9.1b.1 8799089 8804804 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134822   596   IV: 8799089-8799684 Caenorhabditis elegans
Exon134824   84   IV: 8799737-8799820 Caenorhabditis elegans
Exon134827   229   IV: 8800016-8800244 Caenorhabditis elegans
Exon134830   74   IV: 8800297-8800370 Caenorhabditis elegans
Exon134833   186   IV: 8800416-8800601 Caenorhabditis elegans
Exon134836   240   IV: 8800659-8800898 Caenorhabditis elegans
Exon134839   337   IV: 8800951-8801287 Caenorhabditis elegans
Exon134842   152   IV: 8801338-8801489 Caenorhabditis elegans
Exon134845   249   IV: 8801597-8801845 Caenorhabditis elegans
Exon134848   85   IV: 8801894-8801978 Caenorhabditis elegans
Exon134851   130   IV: 8802582-8802711 Caenorhabditis elegans
Exon134854   79   IV: 8802761-8802839 Caenorhabditis elegans
Exon134857   126   IV: 8802891-8803016 Caenorhabditis elegans
Exon134861   165   IV: 8803964-8804128 Caenorhabditis elegans
Exon134863   129   IV: 8804676-8804804 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33D9.1b.1 8799089 8804804 -1

1 Sequence

Length
2861

1 Sequence Ontology Term

Identifier Name Description
transcript