WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28C6.1i.1 Sequence Name  T28C6.1i.1
Length (nt)  784   Chromosome Location  IV: 8816331-8818510
Chromosome . Primary Identifier  IV Chromosome Location . Start  8816331
Chromosome Location . End  8818510 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28C6.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012118 grsp-2 T28C6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28C6.1i T28C6.1i 630   IV: 8816348-8816402

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28C6.1i.1 8816331 8818510 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134867   72   IV: 8816331-8816402 Caenorhabditis elegans
Exon134889   147   IV: 8817085-8817231 Caenorhabditis elegans
Exon134898   207   IV: 8817353-8817559 Caenorhabditis elegans
Exon134907   87   IV: 8817794-8817880 Caenorhabditis elegans
Exon134913   66   IV: 8817928-8817993 Caenorhabditis elegans
Exon134924   205   IV: 8818306-8818510 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28C6.1i.1 8816331 8818510 1

1 Sequence

Length
784

1 Sequence Ontology Term

Identifier Name Description
transcript