WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28C6.1c.1 Sequence Name  T28C6.1c.1
Length (nt)  789   Chromosome Location  IV: 8816348-8818004
Chromosome . Primary Identifier  IV Chromosome Location . Start  8816348
Chromosome Location . End  8818004 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28C6.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012118 grsp-2 T28C6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28C6.1c T28C6.1c 789   IV: 8816348-8816402

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28C6.1c.1 8816348 8818004 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134870   55   IV: 8816348-8816402 Caenorhabditis elegans
Exon134880   216   IV: 8816674-8816889 Caenorhabditis elegans
Exon134883   147   IV: 8817085-8817231 Caenorhabditis elegans
Exon134892   207   IV: 8817353-8817559 Caenorhabditis elegans
Exon134901   87   IV: 8817794-8817880 Caenorhabditis elegans
Exon134914   77   IV: 8817928-8818004 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28C6.1c.1 8816348 8818004 1

1 Sequence

Length
789

1 Sequence Ontology Term

Identifier Name Description
transcript