WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28C6.7a.1 Sequence Name  T28C6.7a.1
Length (nt)  7452   Chromosome Location  IV: 8827800-8840675
Chromosome . Primary Identifier  IV Chromosome Location . Start  8827800
Chromosome Location . End  8840675 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28C6.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012121 T28C6.7 T28C6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28C6.7a T28C6.7a 6945   IV: 8827804-8827953

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T28C6.7a.1 8827800 8840675 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134940   154   IV: 8827800-8827953 Caenorhabditis elegans
Exon134944   214   IV: 8828001-8828214 Caenorhabditis elegans
Exon134948   476   IV: 8828519-8828994 Caenorhabditis elegans
Exon134952   393   IV: 8829049-8829441 Caenorhabditis elegans
Exon134958   94   IV: 8829689-8829782 Caenorhabditis elegans
Exon134965   321   IV: 8831685-8832005 Caenorhabditis elegans
Exon134969   136   IV: 8832275-8832410 Caenorhabditis elegans
Exon134973   132   IV: 8832555-8832686 Caenorhabditis elegans
Exon134979   604   IV: 8832856-8833459 Caenorhabditis elegans
Exon134981   268   IV: 8833514-8833781 Caenorhabditis elegans
Exon134985   856   IV: 8833873-8834728 Caenorhabditis elegans
Exon134989   557   IV: 8834776-8835332 Caenorhabditis elegans
Exon134993   173   IV: 8836521-8836693 Caenorhabditis elegans
Exon134997   72   IV: 8836753-8836824 Caenorhabditis elegans
Exon135001   432   IV: 8836869-8837300 Caenorhabditis elegans
Exon135005   84   IV: 8837346-8837429 Caenorhabditis elegans
Exon135009   447   IV: 8837530-8837976 Caenorhabditis elegans
Exon135013   291   IV: 8838082-8838372 Caenorhabditis elegans
Exon135017   363   IV: 8838467-8838829 Caenorhabditis elegans
Exon135021   518   IV: 8838915-8839432 Caenorhabditis elegans
Exon135025   331   IV: 8839595-8839925 Caenorhabditis elegans
Exon135034   536   IV: 8840140-8840675 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T28C6.7a.1 8827800 8840675 1

1 Sequence

Length
7452

1 Sequence Ontology Term

Identifier Name Description
transcript