WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28C6.7c.1 Sequence Name  T28C6.7c.1
Length (nt)  6957   Chromosome Location  IV: 8827804-8840172
Chromosome . Primary Identifier  IV Chromosome Location . Start  8827804
Chromosome Location . End  8840172 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28C6.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012121 T28C6.7 T28C6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28C6.7c T28C6.7c 6957   IV: 8827804-8827953

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T28C6.7c.1 8827804 8840172 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134942   150   IV: 8827804-8827953 Caenorhabditis elegans
Exon134946   214   IV: 8828001-8828214 Caenorhabditis elegans
Exon134950   476   IV: 8828519-8828994 Caenorhabditis elegans
Exon134954   393   IV: 8829049-8829441 Caenorhabditis elegans
Exon134960   94   IV: 8829689-8829782 Caenorhabditis elegans
Exon134967   321   IV: 8831685-8832005 Caenorhabditis elegans
Exon134971   136   IV: 8832275-8832410 Caenorhabditis elegans
Exon134975   132   IV: 8832555-8832686 Caenorhabditis elegans
Exon134977   616   IV: 8832844-8833459 Caenorhabditis elegans
Exon134983   268   IV: 8833514-8833781 Caenorhabditis elegans
Exon134987   856   IV: 8833873-8834728 Caenorhabditis elegans
Exon134991   557   IV: 8834776-8835332 Caenorhabditis elegans
Exon134994   173   IV: 8836521-8836693 Caenorhabditis elegans
Exon134999   72   IV: 8836753-8836824 Caenorhabditis elegans
Exon135003   432   IV: 8836869-8837300 Caenorhabditis elegans
Exon135007   84   IV: 8837346-8837429 Caenorhabditis elegans
Exon135011   447   IV: 8837530-8837976 Caenorhabditis elegans
Exon135015   291   IV: 8838082-8838372 Caenorhabditis elegans
Exon135019   363   IV: 8838467-8838829 Caenorhabditis elegans
Exon135023   518   IV: 8838915-8839432 Caenorhabditis elegans
Exon135027   331   IV: 8839595-8839925 Caenorhabditis elegans
Exon135031   33   IV: 8840140-8840172 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T28C6.7c.1 8827804 8840172 1

1 Sequence

Length
6957

1 Sequence Ontology Term

Identifier Name Description
transcript