WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:T28C6.7d.1 Sequence Name  T28C6.7d.1
Length (nt)  6915   Chromosome Location  IV: 8827804-8840172
Chromosome . Primary Identifier  IV Chromosome Location . Start  8827804
Chromosome Location . End  8840172 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28C6.7d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012121 T28C6.7 T28C6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28C6.7d T28C6.7d 6915   IV: 8827804-8827953

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28C6.7d.1 8827804 8840172 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134943   150   IV: 8827804-8827953 Caenorhabditis elegans
Exon134947   214   IV: 8828001-8828214 Caenorhabditis elegans
Exon134951   476   IV: 8828519-8828994 Caenorhabditis elegans
Exon134955   393   IV: 8829049-8829441 Caenorhabditis elegans
Exon134961   94   IV: 8829689-8829782 Caenorhabditis elegans
Exon134968   321   IV: 8831685-8832005 Caenorhabditis elegans
Exon134972   136   IV: 8832275-8832410 Caenorhabditis elegans
Exon134976   132   IV: 8832555-8832686 Caenorhabditis elegans
Exon134978   616   IV: 8832844-8833459 Caenorhabditis elegans
Exon134984   268   IV: 8833514-8833781 Caenorhabditis elegans
Exon134988   856   IV: 8833873-8834728 Caenorhabditis elegans
Exon134992   557   IV: 8834776-8835332 Caenorhabditis elegans
Exon134996   131   IV: 8836563-8836693 Caenorhabditis elegans
Exon135000   72   IV: 8836753-8836824 Caenorhabditis elegans
Exon135004   432   IV: 8836869-8837300 Caenorhabditis elegans
Exon135008   84   IV: 8837346-8837429 Caenorhabditis elegans
Exon135012   447   IV: 8837530-8837976 Caenorhabditis elegans
Exon135016   291   IV: 8838082-8838372 Caenorhabditis elegans
Exon135020   363   IV: 8838467-8838829 Caenorhabditis elegans
Exon135024   518   IV: 8838915-8839432 Caenorhabditis elegans
Exon135028   331   IV: 8839595-8839925 Caenorhabditis elegans
Exon135032   33   IV: 8840140-8840172 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28C6.7d.1 8827804 8840172 1

1 Sequence

Length
6915

1 Sequence Ontology Term

Identifier Name Description
transcript