WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28C6.7a.1 Sequence Name  T28C6.7a.1
Length (nt)  7452   Chromosome Location  IV: 8827800-8840675
Chromosome . Primary Identifier  IV Chromosome Location . Start  8827800
Chromosome Location . End  8840675 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28C6.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012121 T28C6.7 T28C6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28C6.7a T28C6.7a 6945   IV: 8827804-8827953

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28C6.7a.1 8827800 8840675 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134995   154   IV: 8827800-8827953 Caenorhabditis elegans
Exon134999   214   IV: 8828001-8828214 Caenorhabditis elegans
Exon135003   476   IV: 8828519-8828994 Caenorhabditis elegans
Exon135007   393   IV: 8829049-8829441 Caenorhabditis elegans
Exon135013   94   IV: 8829689-8829782 Caenorhabditis elegans
Exon135020   321   IV: 8831685-8832005 Caenorhabditis elegans
Exon135024   136   IV: 8832275-8832410 Caenorhabditis elegans
Exon135028   132   IV: 8832555-8832686 Caenorhabditis elegans
Exon135034   604   IV: 8832856-8833459 Caenorhabditis elegans
Exon135036   268   IV: 8833514-8833781 Caenorhabditis elegans
Exon135040   856   IV: 8833873-8834728 Caenorhabditis elegans
Exon135044   557   IV: 8834776-8835332 Caenorhabditis elegans
Exon135048   173   IV: 8836521-8836693 Caenorhabditis elegans
Exon135052   72   IV: 8836753-8836824 Caenorhabditis elegans
Exon135056   432   IV: 8836869-8837300 Caenorhabditis elegans
Exon135060   84   IV: 8837346-8837429 Caenorhabditis elegans
Exon135064   447   IV: 8837530-8837976 Caenorhabditis elegans
Exon135068   291   IV: 8838082-8838372 Caenorhabditis elegans
Exon135072   363   IV: 8838467-8838829 Caenorhabditis elegans
Exon135076   518   IV: 8838915-8839432 Caenorhabditis elegans
Exon135080   331   IV: 8839595-8839925 Caenorhabditis elegans
Exon135089   536   IV: 8840140-8840675 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28C6.7a.1 8827800 8840675 1

1 Sequence

Length
7452

1 Sequence Ontology Term

Identifier Name Description
transcript