WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28C6.7c.1 Sequence Name  T28C6.7c.1
Length (nt)  6957   Chromosome Location  IV: 8827804-8840172
Chromosome . Primary Identifier  IV Chromosome Location . Start  8827804
Chromosome Location . End  8840172 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28C6.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012121 T28C6.7 T28C6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28C6.7c T28C6.7c 6957   IV: 8827804-8827953

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T28C6.7c.1 8827804 8840172 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon134997   150   IV: 8827804-8827953 Caenorhabditis elegans
Exon135001   214   IV: 8828001-8828214 Caenorhabditis elegans
Exon135005   476   IV: 8828519-8828994 Caenorhabditis elegans
Exon135009   393   IV: 8829049-8829441 Caenorhabditis elegans
Exon135015   94   IV: 8829689-8829782 Caenorhabditis elegans
Exon135022   321   IV: 8831685-8832005 Caenorhabditis elegans
Exon135026   136   IV: 8832275-8832410 Caenorhabditis elegans
Exon135030   132   IV: 8832555-8832686 Caenorhabditis elegans
Exon135032   616   IV: 8832844-8833459 Caenorhabditis elegans
Exon135038   268   IV: 8833514-8833781 Caenorhabditis elegans
Exon135042   856   IV: 8833873-8834728 Caenorhabditis elegans
Exon135046   557   IV: 8834776-8835332 Caenorhabditis elegans
Exon135049   173   IV: 8836521-8836693 Caenorhabditis elegans
Exon135054   72   IV: 8836753-8836824 Caenorhabditis elegans
Exon135058   432   IV: 8836869-8837300 Caenorhabditis elegans
Exon135062   84   IV: 8837346-8837429 Caenorhabditis elegans
Exon135066   447   IV: 8837530-8837976 Caenorhabditis elegans
Exon135070   291   IV: 8838082-8838372 Caenorhabditis elegans
Exon135074   363   IV: 8838467-8838829 Caenorhabditis elegans
Exon135078   518   IV: 8838915-8839432 Caenorhabditis elegans
Exon135082   331   IV: 8839595-8839925 Caenorhabditis elegans
Exon135086   33   IV: 8840140-8840172 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T28C6.7c.1 8827804 8840172 1

1 Sequence

Length
6957

1 Sequence Ontology Term

Identifier Name Description
transcript