WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G9.3c.1 Sequence Name  C09G9.3c.1
Length (nt)  456   Chromosome Location  IV: 8871160-8873005
Chromosome . Primary Identifier  IV Chromosome Location . Start  8871160
Chromosome Location . End  8873005 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G9.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007494 C09G9.3 C09G9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G9.3c C09G9.3c 456   IV: 8871160-8871238

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G9.3c.1 8871160 8873005 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135167   79   IV: 8871160-8871238 Caenorhabditis elegans
Exon135169   114   IV: 8871289-8871402 Caenorhabditis elegans
Exon135171   118   IV: 8871449-8871566 Caenorhabditis elegans
Exon135172   54   IV: 8872366-8872419 Caenorhabditis elegans
Exon135175   82   IV: 8872635-8872716 Caenorhabditis elegans
Exon135176   9   IV: 8872997-8873005 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G9.3c.1 8871160 8873005 -1

1 Sequence

Length
456

1 Sequence Ontology Term

Identifier Name Description
transcript