WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G9.7a.1 Sequence Name  C09G9.7a.1
Length (nt)  915   Chromosome Location  IV: 8877390-8879910
Chromosome . Primary Identifier  IV Chromosome Location . Start  8877390
Chromosome Location . End  8879910 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G9.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007496 npax-4 C09G9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G9.7a C09G9.7a 609   IV: 8877611-8877689

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G9.7a.1 8877390 8879910 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135193   300   IV: 8877390-8877689 Caenorhabditis elegans
Exon135195   141   IV: 8878265-8878405 Caenorhabditis elegans
Exon135196   175   IV: 8879202-8879376 Caenorhabditis elegans
Exon135198   108   IV: 8879420-8879527 Caenorhabditis elegans
Exon135199   191   IV: 8879720-8879910 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G9.7a.1 8877390 8879910 -1

1 Sequence

Length
915

1 Sequence Ontology Term

Identifier Name Description
transcript