WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27B7.4a.1 Sequence Name  C27B7.4a.1
Length (nt)  4187   Chromosome Location  IV: 8894083-8901386
Chromosome . Primary Identifier  IV Chromosome Location . Start  8894083
Chromosome Location . End  8901386 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27B7.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007761 rad-54.L2 C27B7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27B7.4a C27B7.4a 3825   IV: 8894106-8894193

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27B7.4a.1 8894083 8901386 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135239   111   IV: 8894083-8894193 Caenorhabditis elegans
Exon135241   76   IV: 8894245-8894320 Caenorhabditis elegans
Exon135244   389   IV: 8896673-8897061 Caenorhabditis elegans
Exon135247   159   IV: 8897111-8897269 Caenorhabditis elegans
Exon135250   393   IV: 8897319-8897711 Caenorhabditis elegans
Exon135253   234   IV: 8897756-8897989 Caenorhabditis elegans
Exon135256   746   IV: 8898316-8899061 Caenorhabditis elegans
Exon135259   540   IV: 8899141-8899680 Caenorhabditis elegans
Exon135262   964   IV: 8899759-8900722 Caenorhabditis elegans
Exon135265   150   IV: 8900766-8900915 Caenorhabditis elegans
Exon135268   425   IV: 8900962-8901386 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27B7.4a.1 8894083 8901386 1

1 Sequence

Length
4187

1 Sequence Ontology Term

Identifier Name Description
transcript