WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27B7.4b.2 Sequence Name  C27B7.4b.2
Length (nt)  3935   Chromosome Location  IV: 8894106-8901118
Chromosome . Primary Identifier  IV Chromosome Location . Start  8894106
Chromosome Location . End  8901118 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27B7.4b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007761 rad-54.L2 C27B7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27B7.4b C27B7.4b 2808   IV: 8894106-8894193

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27B7.4b.2 8894106 8901118 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135240   88   IV: 8894106-8894193 Caenorhabditis elegans
Exon135243   76   IV: 8894245-8894320 Caenorhabditis elegans
Exon135246   389   IV: 8896673-8897061 Caenorhabditis elegans
Exon135249   159   IV: 8897111-8897269 Caenorhabditis elegans
Exon135252   393   IV: 8897319-8897711 Caenorhabditis elegans
Exon135255   234   IV: 8897756-8897989 Caenorhabditis elegans
Exon135258   746   IV: 8898316-8899061 Caenorhabditis elegans
Exon135261   540   IV: 8899141-8899680 Caenorhabditis elegans
Exon135264   957   IV: 8899766-8900722 Caenorhabditis elegans
Exon135267   353   IV: 8900766-8901118 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27B7.4b.2 8894106 8901118 1

1 Sequence

Length
3935

1 Sequence Ontology Term

Identifier Name Description
transcript