WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27B7.6.1 Sequence Name  C27B7.6.1
Length (nt)  1636   Chromosome Location  IV: 8903167-8906345
Chromosome . Primary Identifier  IV Chromosome Location . Start  8903167
Chromosome Location . End  8906345 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27B7.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007763 C27B7.6 C27B7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27B7.6 C27B7.6 1365   IV: 8903247-8903400

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27B7.6.1 8903167 8906345 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135274   234   IV: 8903167-8903400 Caenorhabditis elegans
Exon135275   81   IV: 8903701-8903781 Caenorhabditis elegans
Exon135276   130   IV: 8903889-8904018 Caenorhabditis elegans
Exon135277   232   IV: 8904100-8904331 Caenorhabditis elegans
Exon135278   195   IV: 8904430-8904624 Caenorhabditis elegans
Exon135279   108   IV: 8905093-8905200 Caenorhabditis elegans
Exon135280   241   IV: 8905264-8905504 Caenorhabditis elegans
Exon135281   98   IV: 8905549-8905646 Caenorhabditis elegans
Exon135282   114   IV: 8905693-8905806 Caenorhabditis elegans
Exon135283   203   IV: 8906143-8906345 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27B7.6.1 8903167 8906345 -1

1 Sequence

Length
1636

1 Sequence Ontology Term

Identifier Name Description
transcript