WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27B7.1a.1 Sequence Name  C27B7.1a.1
Length (nt)  1157   Chromosome Location  IV: 8891466-8892747
Chromosome . Primary Identifier  IV Chromosome Location . Start  8891466
Chromosome Location . End  8892747 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27B7.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005007 spr-2 C27B7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27B7.1a C27B7.1a 939   IV: 8891475-8891972

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27B7.1a.1 8891466 8892747 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135284   507   IV: 8891466-8891972 Caenorhabditis elegans
Exon135286   198   IV: 8892049-8892246 Caenorhabditis elegans
Exon135288   452   IV: 8892296-8892747 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27B7.1a.1 8891466 8892747 1

1 Sequence

Length
1157

1 Sequence Ontology Term

Identifier Name Description
transcript