WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1046.2.1 Sequence Name  D1046.2.1
Length (nt)  1621   Chromosome Location  IV: 8924167-8926067
Chromosome . Primary Identifier  IV Chromosome Location . Start  8924167
Chromosome Location . End  8926067 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1046.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008363 D1046.2 D1046.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1046.2 D1046.2 1212   IV: 8924568-8924852

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1046.2.1 8924167 8926067 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135354   686   IV: 8924167-8924852 Caenorhabditis elegans
Exon135355   291   IV: 8924909-8925199 Caenorhabditis elegans
Exon135356   118   IV: 8925242-8925359 Caenorhabditis elegans
Exon135357   176   IV: 8925409-8925584 Caenorhabditis elegans
Exon135358   130   IV: 8925629-8925758 Caenorhabditis elegans
Exon135359   140   IV: 8925807-8925946 Caenorhabditis elegans
Exon135360   80   IV: 8925988-8926067 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1046.2.1 8924167 8926067 -1

1 Sequence

Length
1621

1 Sequence Ontology Term

Identifier Name Description
transcript