WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1046.1c.5 Sequence Name  D1046.1c.5
Length (nt)  1842   Chromosome Location  IV: 8926328-8930345
Chromosome . Primary Identifier  IV Chromosome Location . Start  8926328
Chromosome Location . End  8930345 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1046.1c.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008362 cfim-2 D1046.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1046.1c D1046.1c 1476   IV: 8926340-8926425

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1c.5 8926328 8930345 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135365   98   IV: 8926328-8926425 Caenorhabditis elegans
Exon135384   64   IV: 8926478-8926541 Caenorhabditis elegans
Exon135396   153   IV: 8926592-8926744 Caenorhabditis elegans
Exon135408   118   IV: 8926789-8926906 Caenorhabditis elegans
Exon135420   143   IV: 8926955-8927097 Caenorhabditis elegans
Exon135435   416   IV: 8927456-8927871 Caenorhabditis elegans
Exon135441   109   IV: 8927918-8928026 Caenorhabditis elegans
Exon135461   225   IV: 8928083-8928307 Caenorhabditis elegans
Exon135474   119   IV: 8928823-8928941 Caenorhabditis elegans
Exon135487   267   IV: 8928987-8929253 Caenorhabditis elegans
Exon135503   130   IV: 8930216-8930345 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1c.5 8926328 8930345 1

1 Sequence

Length
1842

1 Sequence Ontology Term

Identifier Name Description
transcript