WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1046.1a.4 Sequence Name  D1046.1a.4
Length (nt)  1840   Chromosome Location  IV: 8926328-8930349
Chromosome . Primary Identifier  IV Chromosome Location . Start  8926328
Chromosome Location . End  8930349 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1046.1a.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008362 cfim-2 D1046.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1046.1a D1046.1a 1470   IV: 8926340-8926425

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1a.4 8926328 8930349 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135370   98   IV: 8926328-8926425 Caenorhabditis elegans
Exon135377   64   IV: 8926478-8926541 Caenorhabditis elegans
Exon135388   153   IV: 8926592-8926744 Caenorhabditis elegans
Exon135400   118   IV: 8926789-8926906 Caenorhabditis elegans
Exon135412   143   IV: 8926955-8927097 Caenorhabditis elegans
Exon135427   416   IV: 8927456-8927871 Caenorhabditis elegans
Exon135445   103   IV: 8927924-8928026 Caenorhabditis elegans
Exon135453   225   IV: 8928083-8928307 Caenorhabditis elegans
Exon135466   119   IV: 8928823-8928941 Caenorhabditis elegans
Exon135486   267   IV: 8928987-8929253 Caenorhabditis elegans
Exon135509   134   IV: 8930216-8930349 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1a.4 8926328 8930349 1

1 Sequence

Length
1840

1 Sequence Ontology Term

Identifier Name Description
transcript