WormMine: Gene WBGene00045136

• WormBase Gene ID: WBGene00045136
• Gene Name: D1046.6
• Sequence Name: D1046.6
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by rsr-2; cep-1; and ilc-17.1 based on RNA-seq studies.
• Biotype: SO:0001267
• Genetic Position: :±
• Length (nt): 129

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00045136

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:D1046.6	D1046.6	129	IV: 8927265-8927393

Other

0 CDSs

18 RNAi Result

• WBRNAi00024934
• WBRNAi00027243
• WBRNAi00083702
• WBRNAi00086570
• WBRNAi00086569
• WBRNAi00007968
• WBRNAi00012520
• WBRNAi00030335
• WBRNAi00063793
• WBRNAi00063794
• WBRNAi00063795
• WBRNAi00066453
• WBRNAi00083597
• WBRNAi00083791
• WBRNAi00114519
• WBRNAi00083510
• WBRNAi00085114
• WBRNAi00085115

7 Allele

• gk964278
• gk964500
• gk962765
• gk962666
• tm10167
• gk466193
• gk208062

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00045136
• Start: 8927265
• End: 8927393
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

6 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts depleted in purified oocyte P bodies comparing to in whole oocytes.	DESeq2, FDR < 0.05, fold change > 2.	WBPaper00065975:P-body_vs_oocyte_depleted
	Transcripts depleted in purified oocyte P bodies comparing to in the whole animal.	DESeq2, FDR < 0.05, fold change > 2.	WBPaper00065975:P-body_vs_WholeAnimal_depleted
	Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066594:ilc-17.1(syb5296)_upregulated
	ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq.	ncRNAs with more than 2 fold difference in expression are considered differentially expressed	WBPaper00045380:cep-1(gk138)_upregulated_normal
	Genes that showed significantly increased expression level in rsr-2(RNAi) animals comparing to in gfp(RNAi) control, according to RNAseq analysis.	This analysis uses Cufflinks-Cuffdiff to quantify and identify transcripts with a significant level of expression between different conditions.	WBPaper00042477:rsr-2(RNAi)_upregulated_RNAseq
	ncRNAs with significantly increased expression in cep-1(gk138) than in N2 after UV irradiation, according to RNAseq.	ncRNAs with more than 2 fold difference in expression are considered differentially expressed	WBPaper00045380:cep-1(gk138)_upregulated_UV

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00045136
• Start: 8927265
• End: 8927393
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 129

1 Sequence Ontology Term