WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1046.1e.1 Sequence Name  D1046.1e.1
Length (nt)  882   Chromosome Location  IV: 8927480-8929029
Chromosome . Primary Identifier  IV Chromosome Location . Start  8927480
Chromosome Location . End  8929029 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1046.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008362 cfim-2 D1046.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1046.1e D1046.1e 882   IV: 8927480-8927871

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1e.1 8927480 8929029 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135436   392   IV: 8927480-8927871 Caenorhabditis elegans
Exon135449   103   IV: 8927924-8928026 Caenorhabditis elegans
Exon135462   225   IV: 8928083-8928307 Caenorhabditis elegans
Exon135475   119   IV: 8928823-8928941 Caenorhabditis elegans
Exon135476   43   IV: 8928987-8929029 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1046.1e.1 8927480 8929029 1

1 Sequence

Length
882

1 Sequence Ontology Term

Identifier Name Description
transcript