WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1046.4.1 Sequence Name  D1046.4.1
Length (nt)  1894   Chromosome Location  IV: 8933875-8937465
Chromosome . Primary Identifier  IV Chromosome Location . Start  8933875
Chromosome Location . End  8937465 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1046.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008365 D1046.4 D1046.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1046.4 D1046.4 1707   IV: 8933997-8934022

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1046.4.1 8933875 8937465 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135515   148   IV: 8933875-8934022 Caenorhabditis elegans
Exon135516   203   IV: 8934607-8934809 Caenorhabditis elegans
Exon135517   149   IV: 8934902-8935050 Caenorhabditis elegans
Exon135518   228   IV: 8935176-8935403 Caenorhabditis elegans
Exon135519   128   IV: 8935596-8935723 Caenorhabditis elegans
Exon135520   91   IV: 8935775-8935865 Caenorhabditis elegans
Exon135521   156   IV: 8935912-8936067 Caenorhabditis elegans
Exon135522   143   IV: 8936224-8936366 Caenorhabditis elegans
Exon135523   99   IV: 8936423-8936521 Caenorhabditis elegans
Exon135524   120   IV: 8936655-8936774 Caenorhabditis elegans
Exon135525   190   IV: 8936984-8937173 Caenorhabditis elegans
Exon135526   239   IV: 8937227-8937465 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1046.4.1 8933875 8937465 1

1 Sequence

Length
1894

1 Sequence Ontology Term

Identifier Name Description
transcript