WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53B4.1.1 Sequence Name  C53B4.1.1
Length (nt)  1587   Chromosome Location  IV: 8968290-8970565
Chromosome . Primary Identifier  IV Chromosome Location . Start  8968290
Chromosome Location . End  8970565 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53B4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008271 suex-2 C53B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53B4.1 C53B4.1 1509   IV: 8968368-8968374

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C53B4.1.1 8968290 8970565 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135549   85   IV: 8968290-8968374 Caenorhabditis elegans
Exon135550   117   IV: 8968467-8968583 Caenorhabditis elegans
Exon135551   92   IV: 8968626-8968717 Caenorhabditis elegans
Exon135552   83   IV: 8968762-8968844 Caenorhabditis elegans
Exon135553   283   IV: 8968980-8969262 Caenorhabditis elegans
Exon135554   305   IV: 8969426-8969730 Caenorhabditis elegans
Exon135555   115   IV: 8969772-8969886 Caenorhabditis elegans
Exon135556   294   IV: 8969932-8970225 Caenorhabditis elegans
Exon135557   93   IV: 8970275-8970367 Caenorhabditis elegans
Exon135558   120   IV: 8970446-8970565 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C53B4.1.1 8968290 8970565 1

1 Sequence

Length
1587

1 Sequence Ontology Term

Identifier Name Description
transcript