WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C53B4.7d Sequence Name  C53B4.7d
Length (nt)  1149   Chromosome Location  IV: 8988677-8988697
Chromosome . Primary Identifier  IV Chromosome Location . Start  8988677
Chromosome Location . End  8988697
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53B4.7d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40447 BRE-1, isoform d 42.7 382 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00043073
WBRNAi00043074
WBRNAi00012346
WBRNAi00109803
WBRNAi00030103
WBRNAi00109662
WBRNAi00103056
WBRNAi00081136
WBRNAi00109756
WBRNAi00109709
WBRNAi00117469

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C53B4.7d 8988677 8988697 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000266 bre-1 C53B4.7 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C53B4.7d 8988677 8988697 1
CDS:C53B4.7d 8988770 8988880 1
CDS:C53B4.7d 8988931 8989143 1
CDS:C53B4.7d 8989287 8989617 1
CDS:C53B4.7d 8989689 8990098 1
CDS:C53B4.7d 8990212 8990274 1

1 Sequence

Length
1149

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C53B4.7d.1 C53B4.7d.1 1420   IV: 8988576-8990444