WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53D6.8.1 Sequence Name  C53D6.8.1
Length (nt)  621   Chromosome Location  IV: 9001072-9002736
Chromosome . Primary Identifier  IV Chromosome Location . Start  9001072
Chromosome Location . End  9002736 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53D6.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008285 C53D6.8 C53D6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53D6.8 C53D6.8 546   IV: 9001145-9001251

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C53D6.8.1 9001072 9002736 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135828   180   IV: 9001072-9001251 Caenorhabditis elegans
Exon135831   193   IV: 9001669-9001861 Caenorhabditis elegans
Exon135833   158   IV: 9001945-9002102 Caenorhabditis elegans
Exon135834   90   IV: 9002647-9002736 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C53D6.8.1 9001072 9002736 -1

1 Sequence

Length
621

1 Sequence Ontology Term

Identifier Name Description
transcript