WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53D6.2.1 Sequence Name  C53D6.2.1
Length (nt)  1530   Chromosome Location  IV: 9002839-9005410
Chromosome . Primary Identifier  IV Chromosome Location . Start  9002839
Chromosome Location . End  9005410 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53D6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006852 unc-129 C53D6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53D6.2 C53D6.2 1224   IV: 9003120-9003189

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C53D6.2.1 9002839 9005410 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135835   351   IV: 9002839-9003189 Caenorhabditis elegans
Exon135836   224   IV: 9003396-9003619 Caenorhabditis elegans
Exon135837   744   IV: 9003857-9004600 Caenorhabditis elegans
Exon135838   62   IV: 9005020-9005081 Caenorhabditis elegans
Exon135839   149   IV: 9005262-9005410 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C53D6.2.1 9002839 9005410 -1

1 Sequence

Length
1530

1 Sequence Ontology Term

Identifier Name Description
transcript