WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C53D6.6 Sequence Name  C53D6.6
Length (nt)  1848   Chromosome Location  IV: 9027801-9028064
Chromosome . Primary Identifier  IV Chromosome Location . Start  9027801
Chromosome Location . End  9028064
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53D6.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05491 C53D6.6 70.0 615 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00043102
WBRNAi00030121

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C53D6.6 9027801 9028064 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008283 C53D6.6 C53D6.6 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C53D6.6 9027801 9028064 -1
CDS:C53D6.6 9028114 9028356 -1
CDS:C53D6.6 9030218 9030397 -1
CDS:C53D6.6 9030442 9031472 -1
CDS:C53D6.6 9031517 9031646 -1

1 Sequence

Length
1848

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C53D6.6.2 C53D6.6.2 2105   IV: 9027634-9032667
Transcript:C53D6.6.1 C53D6.6.1 1978   IV: 9027680-9031655