WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC410.1a.1 Sequence Name  ZC410.1a.1
Length (nt)  1482   Chromosome Location  IV: 9070010-9073622
Chromosome . Primary Identifier  IV Chromosome Location . Start  9070010
Chromosome Location . End  9073622 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC410.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003610 nhr-11 ZC410.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC410.1a ZC410.1a 1380   IV: 9070010-9070081

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC410.1a.1 9070010 9073622 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon135983   72   IV: 9070010-9070081 Caenorhabditis elegans
Exon135984   85   IV: 9070161-9070245 Caenorhabditis elegans
Exon135986   75   IV: 9070679-9070753 Caenorhabditis elegans
Exon135988   221   IV: 9071032-9071252 Caenorhabditis elegans
Exon135992   231   IV: 9071975-9072205 Caenorhabditis elegans
Exon135996   132   IV: 9072313-9072444 Caenorhabditis elegans
Exon136001   65   IV: 9072494-9072558 Caenorhabditis elegans
Exon136006   132   IV: 9072606-9072737 Caenorhabditis elegans
Exon136011   116   IV: 9072784-9072899 Caenorhabditis elegans
Exon136016   149   IV: 9073220-9073368 Caenorhabditis elegans
Exon136025   204   IV: 9073419-9073622 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC410.1a.1 9070010 9073622 1

1 Sequence

Length
1482

1 Sequence Ontology Term

Identifier Name Description
transcript