WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01F6.6c.1 Sequence Name  C01F6.6c.1
Length (nt)  1723   Chromosome Location  IV: 9119098-9130381
Chromosome . Primary Identifier  IV Chromosome Location . Start  9119098
Chromosome Location . End  9130381 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01F6.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006438 nrfl-1 C01F6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01F6.6c C01F6.6c 1272   IV: 9119100-9119168

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01F6.6c.1 9119098 9130381 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136098   71   IV: 9119098-9119168 Caenorhabditis elegans
Exon136101   80   IV: 9119427-9119506 Caenorhabditis elegans
Exon136106   208   IV: 9119754-9119961 Caenorhabditis elegans
Exon136110   72   IV: 9120195-9120266 Caenorhabditis elegans
Exon136121   81   IV: 9127195-9127275 Caenorhabditis elegans
Exon136131   396   IV: 9127355-9127750 Caenorhabditis elegans
Exon136141   96   IV: 9127902-9127997 Caenorhabditis elegans
Exon136158   139   IV: 9129288-9129426 Caenorhabditis elegans
Exon136168   82   IV: 9129680-9129761 Caenorhabditis elegans
Exon136184   498   IV: 9129884-9130381 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01F6.6c.1 9119098 9130381 1

1 Sequence

Length
1723

1 Sequence Ontology Term

Identifier Name Description
transcript