WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01F6.6a.1 Sequence Name  C01F6.6a.1
Length (nt)  1857   Chromosome Location  IV: 9119098-9130383
Chromosome . Primary Identifier  IV Chromosome Location . Start  9119098
Chromosome Location . End  9130383 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01F6.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006438 nrfl-1 C01F6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01F6.6a C01F6.6a 1404   IV: 9119100-9119168

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01F6.6a.1 9119098 9130383 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136099   71   IV: 9119098-9119168 Caenorhabditis elegans
Exon136100   80   IV: 9119427-9119506 Caenorhabditis elegans
Exon136105   208   IV: 9119754-9119961 Caenorhabditis elegans
Exon136119   81   IV: 9127195-9127275 Caenorhabditis elegans
Exon136129   396   IV: 9127355-9127750 Caenorhabditis elegans
Exon136139   96   IV: 9127902-9127997 Caenorhabditis elegans
Exon136149   204   IV: 9128485-9128688 Caenorhabditis elegans
Exon136156   139   IV: 9129288-9129426 Caenorhabditis elegans
Exon136166   82   IV: 9129680-9129761 Caenorhabditis elegans
Exon136185   500   IV: 9129884-9130383 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01F6.6a.1 9119098 9130383 1

1 Sequence

Length
1857

1 Sequence Ontology Term

Identifier Name Description
transcript