WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01F6.6h.1 Sequence Name  C01F6.6h.1
Length (nt)  1931   Chromosome Location  IV: 9119092-9130379
Chromosome . Primary Identifier  IV Chromosome Location . Start  9119092
Chromosome Location . End  9130379 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01F6.6h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006438 nrfl-1 C01F6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01F6.6h C01F6.6h 1476   IV: 9119100-9119168

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01F6.6h.1 9119092 9130379 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136151   77   IV: 9119092-9119168 Caenorhabditis elegans
Exon136158   80   IV: 9119427-9119506 Caenorhabditis elegans
Exon136163   208   IV: 9119754-9119961 Caenorhabditis elegans
Exon136167   72   IV: 9120195-9120266 Caenorhabditis elegans
Exon136180   81   IV: 9127195-9127275 Caenorhabditis elegans
Exon136191   396   IV: 9127355-9127750 Caenorhabditis elegans
Exon136200   96   IV: 9127902-9127997 Caenorhabditis elegans
Exon136209   204   IV: 9128485-9128688 Caenorhabditis elegans
Exon136218   139   IV: 9129288-9129426 Caenorhabditis elegans
Exon136228   82   IV: 9129680-9129761 Caenorhabditis elegans
Exon136237   496   IV: 9129884-9130379 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01F6.6h.1 9119092 9130379 1

1 Sequence

Length
1931

1 Sequence Ontology Term

Identifier Name Description
transcript