WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01F6.6j.1 Sequence Name  C01F6.6j.1
Length (nt)  792   Chromosome Location  IV: 9127246-9129932
Chromosome . Primary Identifier  IV Chromosome Location . Start  9127246
Chromosome Location . End  9129932 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01F6.6j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006438 nrfl-1 C01F6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01F6.6j C01F6.6j 792   IV: 9127246-9127275

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01F6.6j.1 9127246 9129932 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136128   30   IV: 9127246-9127275 Caenorhabditis elegans
Exon136138   396   IV: 9127355-9127750 Caenorhabditis elegans
Exon136147   96   IV: 9127902-9127997 Caenorhabditis elegans
Exon136165   139   IV: 9129288-9129426 Caenorhabditis elegans
Exon136175   82   IV: 9129680-9129761 Caenorhabditis elegans
Exon136179   49   IV: 9129884-9129932 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01F6.6j.1 9127246 9129932 1

1 Sequence

Length
792

1 Sequence Ontology Term

Identifier Name Description
transcript