WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46C2.1k.1 Sequence Name  C46C2.1k.1
Length (nt)  5049   Chromosome Location  IV: 9200431-9211580
Chromosome . Primary Identifier  IV Chromosome Location . Start  9200431
Chromosome Location . End  9211580 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46C2.1k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006941 wnk-1 C46C2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46C2.1k C46C2.1k 5049   IV: 9200431-9200439

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46C2.1k.1 9200431 9211580 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136335   9   IV: 9200431-9200439 Caenorhabditis elegans
Exon136348   79   IV: 9202246-9202324 Caenorhabditis elegans
Exon136364   70   IV: 9202629-9202698 Caenorhabditis elegans
Exon136380   85   IV: 9203293-9203377 Caenorhabditis elegans
Exon136397   443   IV: 9203709-9204151 Caenorhabditis elegans
Exon136423   302   IV: 9204207-9204508 Caenorhabditis elegans
Exon136443   323   IV: 9204578-9204900 Caenorhabditis elegans
Exon136463   1245   IV: 9204951-9206195 Caenorhabditis elegans
Exon136483   699   IV: 9206484-9207182 Caenorhabditis elegans
Exon136503   765   IV: 9207234-9207998 Caenorhabditis elegans
Exon136517   441   IV: 9208076-9208516 Caenorhabditis elegans
Exon136555   53   IV: 9210364-9210416 Caenorhabditis elegans
Exon136577   205   IV: 9210472-9210676 Caenorhabditis elegans
Exon136602   330   IV: 9211251-9211580 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46C2.1k.1 9200431 9211580 1

1 Sequence

Length
5049

1 Sequence Ontology Term

Identifier Name Description
transcript