WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46C2.1c.1 Sequence Name  C46C2.1c.1
Length (nt)  5358   Chromosome Location  IV: 9203294-9211580
Chromosome . Primary Identifier  IV Chromosome Location . Start  9203294
Chromosome Location . End  9211580 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46C2.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006941 wnk-1 C46C2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46C2.1c C46C2.1c 5358   IV: 9203294-9203377

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46C2.1c.1 9203294 9211580 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136389   84   IV: 9203294-9203377 Caenorhabditis elegans
Exon136405   437   IV: 9203715-9204151 Caenorhabditis elegans
Exon136415   302   IV: 9204207-9204508 Caenorhabditis elegans
Exon136435   323   IV: 9204578-9204900 Caenorhabditis elegans
Exon136455   1245   IV: 9204951-9206195 Caenorhabditis elegans
Exon136475   699   IV: 9206484-9207182 Caenorhabditis elegans
Exon136495   765   IV: 9207234-9207998 Caenorhabditis elegans
Exon136525   432   IV: 9208085-9208516 Caenorhabditis elegans
Exon136534   483   IV: 9209094-9209576 Caenorhabditis elegans
Exon136547   53   IV: 9210364-9210416 Caenorhabditis elegans
Exon136569   205   IV: 9210472-9210676 Caenorhabditis elegans
Exon136598   330   IV: 9211251-9211580 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46C2.1c.1 9203294 9211580 1

1 Sequence

Length
5358

1 Sequence Ontology Term

Identifier Name Description
transcript