WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y11D7A.5.1 Sequence Name  Y11D7A.5.1
Length (nt)  743   Chromosome Location  IV: 9244495-9245523
Chromosome . Primary Identifier  IV Chromosome Location . Start  9244495
Chromosome Location . End  9245523 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y11D7A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012429 Y11D7A.5 Y11D7A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y11D7A.5 Y11D7A.5 486   IV: 9244693-9244788

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y11D7A.5.1 9244495 9245523 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136675   294   IV: 9244495-9244788 Caenorhabditis elegans
Exon136676   150   IV: 9244832-9244981 Caenorhabditis elegans
Exon136677   66   IV: 9245146-9245211 Caenorhabditis elegans
Exon136678   233   IV: 9245291-9245523 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y11D7A.5.1 9244495 9245523 -1

1 Sequence

Length
743

1 Sequence Ontology Term

Identifier Name Description
transcript